I'm not a programmer, so I have no clue on how they would work. Bot was separate programs for OP2 though.
The first one I came across was used while WON still existed and would allow you to get 10k common and 10k rare or - even if you had no storage room for it in your colony.
It was a separate program you could download on some weird webpage I remember.
The 2nd one, was posted here on the forums, by someone who meant well I suppose, but never realized the scope of what he was doing. It was also a program, similar to the first one I described, but in multiplayer it would only work for the person hosting the game.. or player #1 to put it another way. So even if player #6 used the program, player #1 would get the bonus